{ "_id": "6a1bdcf11d7bb097a0a17673", "Package": "matos", "Type": "Package", "Title": "Interface with the Mid-Atlantic Acoustic Telemetry Observing\nSystem (MATOS)", "Version": "0.5.0", "Authors@R": "person(\"Michael\", \"O'Brien\", email = \"mike@obrien.page\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0003-1420-6395\"))", "Description": "This package provides HTML-scaping functions to interact\nwith the MATOS website (https://matos.asascience.com/),\nallowing aggregation of data and the downloading and posting of\nfiles.", "Remotes": [ "mhpob/otndo", "mhpob/rvdat" ], "License": "GPL (>= 3)", "Encoding": "UTF-8", "RoxygenNote": "7.3.2", "URL": "https://github.com/mhpob/matos, https://matos.obrien.page", "BugReports": "https://github.com/mhpob/matos/issues", "Config/testthat/edition": "3", "VignetteBuilder": "knitr", "Roxygen": "list(markdown = TRUE)", "Config/pak/sysreqs": "libabsl-dev cmake libfontconfig1-dev\nlibfreetype6-dev libfribidi-dev libgdal-dev gdal-bin\nlibgeos-dev make libharfbuzz-dev libicu-dev libpng-dev\nlibuv1-dev libxml2-dev libssl-dev libproj-dev libsqlite3-dev\nlibudunits2-dev zlib1g-dev", "Repository": "https://ocean-tracking-network.r-universe.dev", "Date/Publication": "2026-03-30 20:47:03 UTC", "RemoteUrl": "https://github.com/mhpob/matos", "RemoteRef": "HEAD", "RemoteSha": "df33d04d233a82857a722fe26e7e0c244d5beaf4", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-30 09:34:04 UTC", "User": "root" }, "Author": "Michael O'Brien [aut, cre] (ORCID:\n)", "Maintainer": "Michael O'Brien ", "MD5sum": "f26e125030ddabb1fdea00154ab84c11", "_user": "ocean-tracking-network", "_type": "src", "_file": "matos_0.5.0.tar.gz", "_fileid": "366c9c521aef56ead52ec6b8282979d3c622383176c556bf289af6dee496b6f8", "_filesize": 193269, "_sha256": "366c9c521aef56ead52ec6b8282979d3c622383176c556bf289af6dee496b6f8", "_created": "2026-05-30T09:34:04.000Z", "_published": "2026-05-31T07:02:09.361Z", "_distro": "noble", "_jobs": [ { "job": 78703920823, "time": 3749, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "FAIL", "artifact": "" }, { "job": 78703920812, "time": 3736, "config": "linux-release-x86_64", "r": "4.6.0", "check": "FAIL", "artifact": "" }, { "job": 78703920800, "time": 172, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "7314276223" }, { "job": 78703920795, "time": 119, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "7314270738" }, { "job": 78703920863, "time": 235, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7307210934" }, { "job": 78703920998, "time": 146, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7307284436" }, { "job": 78703920802, "time": 114, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "7314254217" }, { "job": 78703920803, "time": 110, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "7314253465" }, { "job": 78703920813, "time": 125, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "7314255716" } ], "_buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26621299634", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/mhpob/matos", "_commit": { "id": "df33d04d233a82857a722fe26e7e0c244d5beaf4", "author": "mhpob ", "committer": "mhpob ", "message": "Style code (GHA)\n", "time": 1774903623 }, "_maintainer": { "name": "Michael OBrien", "email": "mike@obrien.page", "login": "mhpob", "mastodon": "@mobrien@fosstodon.org", "bluesky": "@obrien.page", "orcid": "0000-0003-1420-6395", "description": "Faculty Research Assistant at the Chesapeake Biological Laboratory", "uuid": 8228205 }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "cli", "role": "Imports" }, { "package": "curl", "role": "Imports" }, { "package": "getPass", "role": "Imports" }, { "package": "httr", "role": "Imports" }, { "package": "memoise", "role": "Imports" }, { "package": "otndo", "role": "Imports" }, { "package": "rvest", "role": "Imports" }, { "package": "future.apply", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "rvdat", "role": "Suggests" } ], "_owner": "mhpob", "_selfowned": false, "_usedby": 0, "_updates": [ { "week": "2025-31", "n": 4 }, { "week": "2026-14", "n": 2 } ], "_tags": [], "_topics": [ "animal-tracking", "api", "api-wrapper", "biotelemetry", "fish", "fisheries", "fisheries-research", "quarto" ], "_stars": 4, "_contributors": [ { "user": "mhpob", "count": 534, "uuid": 8228205 } ], "_userbio": { "uuid": 47894657, "type": "organization", "name": "Ocean Tracking Network", "description": "The Ocean Tracking Network (OTN) is a global aquatic research, data management and partnership platform" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/matos" }, "_devurl": "https://github.com/mhpob/matos", "_pkgdown": "https://matos.obrien.page", "_searchresults": 9, "_quarto": true, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/matos.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_cranurl": false, "_exports": [ "get_extract_file", "get_extract_updates", "get_otn_template", "get_project_file", "get_tag_search", "list_extract_files", "list_my_projects", "list_project_files", "list_projects", "matos_login", "matos_logoff", "matos_receiver_summary", "matos_tag_summary", "set_matos_credentials", "skip_example_on_ci", "skip_example_on_cran", "skip_example_on_runiverse", "upload_file" ], "_help": [ { "page": "CI_utilities", "title": "Miscellaneous functions for package checking, building, and CI", "topics": [ "CI_utilities", "skip_example_on_ci", "skip_example_on_cran", "skip_example_on_runiverse" ] }, { "page": "get_extract_file", "title": "Download OTN data extraction files from the MATOS website", "topics": [ "get_extract_file" ] }, { "page": "get_extract_updates", "title": "Download all data extraction files that were updated after a certain date", "topics": [ "get_extract_updates" ] }, { "page": "get_otn_template", "title": "Download Ocean-Tracking-Network-style metadata templates", "topics": [ "get_otn_template" ] }, { "page": "get_project_file", "title": "Download project files from the MATOS website", "topics": [ "get_project_file" ] }, { "page": "get_tag_search", "title": "Search for tags on the MATOS website", "topics": [ "get_tag_search" ] }, { "page": "list_extract_files", "title": "List OTN data extraction files", "topics": [ "list_extract_files" ] }, { "page": "list_my_projects", "title": "List personal MATOS projects", "topics": [ "list_my_projects" ] }, { "page": "list_project_files", "title": "List MATOS project files", "topics": [ "list_project_files" ] }, { "page": "list_projects", "title": "List MATOS projects", "topics": [ "list_projects" ] }, { "page": "matos_login", "title": "Log in to your MATOS account", "topics": [ "matos_login" ] }, { "page": "matos_logoff", "title": "Log out of your MATOS account", "topics": [ "matos_logoff" ] }, { "page": "matos_receiver_summary", "title": "Create summary reports of receiver project data from the OTN data push", "topics": [ "matos_receiver_summary" ] }, { "page": "matos_tag_summary", "title": "Create summary reports of receiver project data from the OTN data push", "topics": [ "matos_tag_summary" ] }, { "page": "set_matos_credentials", "title": "Install your MATOS username and password in your '.Renviron' File for repeated use", "topics": [ "set_matos_credentials" ] }, { "page": "upload_file", "title": "Upload files to MATOS", "topics": [ "upload_file" ] }, { "page": "utilities", "title": "Internal functions used by 'matos'", "topics": [ "download_process", "get_file_list", "get_file_list_mem", "get_project_name", "get_project_number", "html_table_to_df", "login_check", "project_check", "scrape_file_urls", "utilities" ] } ], "_readme": "https://github.com/mhpob/matos/raw/HEAD/README.md", "_rundeps": [ "askpass", "base64enc", "brew", "bslib", "cachem", "cellranger", "class", "classInt", "cli", "cpp11", "crayon", "crosstalk", "curl", "data.table", "DBI", "digest", "e1071", "evaluate", "farver", "fastmap", "fontawesome", "fs", "geojsonsf", "geometries", "getPass", "ggplot2", "glue", "gtable", "highr", "hms", "htmltools", "htmlwidgets", "httpuv", "httr", "isoband", "jquerylib", "jsonify", "jsonlite", "KernSmooth", "knitr", "labeling", "later", "lattice", "lazyeval", "leafem", "leaflet", "leaflet.providers", "leafpop", "lifecycle", "magrittr", "mapview", "MASS", "memoise", "mime", "openssl", "otel", "otndo", "pillar", "pkgconfig", "plyr", "png", "prettyunits", "processx", "progress", 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programming", "Download project or data extraction files", "Search and download tag detections", "Upload files to MATOS" ], "created": "2023-02-08 02:10:59", "modified": "2024-12-20 15:57:08", "commits": 12 }, { "source": "matos-otndo.Rmd", "filename": "matos-otndo.html", "title": "Summarizing with otndo", "engine": "knitr::rmarkdown", "headings": [ "ACT members" ], "created": "2023-03-10 23:07:24", "modified": "2023-10-30 19:49:27", "commits": 2 } ], "_score": 4.079181246047625, "_indexed": false, "_nocasepkg": "matos", "_universes": [ "ocean-tracking-network" ], "_indexurl": "https://mhpob.r-universe.dev/matos", "_binaries": [ { "r": "4.6.0", "os": "linux", "version": "0.5.0", "date": "2026-05-29T06:14:25.000Z", "distro": "noble", "commit": "df33d04d233a82857a722fe26e7e0c244d5beaf4", "fileid": "d345a8da8141780de8939843c537495febb41c65db0bf13f9b4ad08c7f138d76", "status": "success", "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26621299634" }, { "r": 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