{
  "_id": "6a1efa50b401979e7341859a",
  "Package": "sporeg",
  "Title": "A package to reconstruct sporadic passive tracking data and\nmeasure the bias and uncertainty incurred through the process",
  "Version": "0.1.0",
  "Authors@R": "person(\"Mary E.\", \"Bowers\", , \"mebowers5@gmail.com\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0002-5823-186X\"))",
  "Description": "This package is the corresponding code for the Methods in\nEcology and Evolution article, \"A novel process to infer the\nreliability of ecological information derived from passive\nacoustic telemetry track reconstruction\". The intended workflow\nis to simulate tracks inside a specified polygon, calculate\nquadrat counts inside grid cells, derive passive detection data\nfrom the simulated tracks using geolocations of listening\nstations, reconstruct the tracks using continuous-time\ncorrelated random walk models, re-route any spurious track\nintersections with a specified boundary, calculate quadrat\ncounts of reconstructed tracks within grid cells, and compare\nquadrat counts between simulated and reconstructed tracks. This\nprocess is designed to be iterated to achieve statistical\npower. The user can then proceed with modeling the relationship\nbetween environmental variables and a desirable result (i.e., a\ngood fit) to determine what environmental variables affect the\nodds of a good fit in grid cells.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "VignetteBuilder": "knitr",
  "Remotes": [
    "jmlondon/pathroutr",
    "ocean-tracking-network/glatos"
  ],
  "URL": "https://mebowers5.github.io/sporeg/",
  "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nlibglpk-dev make libavfilter-dev libicu-dev libxml2-dev\nlibssl-dev libproj-dev libsqlite3-dev libudunits2-dev",
  "Repository": "https://ocean-tracking-network.r-universe.dev",
  "Date/Publication": "2025-03-03 19:21:03 UTC",
  "RemoteUrl": "https://github.com/mebowers5/sporeg",
  "RemoteRef": "HEAD",
  "RemoteSha": "87a62af744ae320b8e87a592fe635914e13ec363",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-18 18:24:22 UTC",
    "User": "root"
  },
  "Author": "Mary E. Bowers [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-5823-186X>)",
  "Maintainer": "Mary E. Bowers <mebowers5@gmail.com>",
  "MD5sum": "a5f843b910d071180c7b82741f32af28",
  "_user": "ocean-tracking-network",
  "_type": "src",
  "_file": "sporeg_0.1.0.tar.gz",
  "_fileid": "b2e5ec1164939d0ad6b9da34de4d5c34599f2cdff6d89b4af1047ae658c1f75d",
  "_filesize": 55337792,
  "_sha256": "b2e5ec1164939d0ad6b9da34de4d5c34599f2cdff6d89b4af1047ae658c1f75d",
  "_created": "2026-05-18T18:24:22.000Z",
  "_published": "2026-06-02T15:44:16.413Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79111154436,
      "time": 2333,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7066747292"
    },
    {
      "job": 79111155000,
      "time": 2296,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7066734681"
    },
    {
      "job": 79111154634,
      "time": 2378,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7066761938"
    },
    {
      "job": 79111154539,
      "time": 1972,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7066619046"
    },
    {
      "job": 79111153037,
      "time": 349,
      "config": "source",
      "r": "4.6.0",
      "check": "ERROR",
      "artifact": "7065923004"
    },
    {
      "job": 79111153147,
      "time": 208,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7362666496"
    },
    {
      "job": 79111154814,
      "time": 2814,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "WARNING",
      "artifact": "7066912302"
    },
    {
      "job": 79111155032,
      "time": 2677,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "WARNING",
      "artifact": "7066864555"
    },
    {
      "job": 79111154669,
      "time": 2812,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "WARNING",
      "artifact": "7066912025"
    }
  ],
  "_buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658",
  "_status": "failure",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/mebowers5/sporeg",
  "_commit": {
    "id": "87a62af744ae320b8e87a592fe635914e13ec363",
    "author": "mebowers5@gmail.com <BowersME@SI.EDU>",
    "committer": "mebowers5@gmail.com <BowersME@SI.EDU>",
    "message": "move rel_site file\n",
    "time": 1741029663
  },
  "_maintainer": {
    "name": "Mary E. Bowers",
    "email": "mebowers5@gmail.com",
    "login": "mebowers5",
    "linkedin": "in/beth-bowers-phd",
    "orcid": "0000-0002-5823-186X",
    "description": "",
    "uuid": 57407056
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "glatos",
      "version": ">= 0.8.0",
      "role": "Imports"
    },
    {
      "package": "pathroutr",
      "version": ">= 0.2.1",
      "role": "Imports"
    },
    {
      "package": "sf",
      "version": ">= 1.0-12",
      "role": "Imports"
    },
    {
      "package": "lubridate",
      "role": "Imports"
    },
    {
      "package": "momentuHMM",
      "role": "Imports"
    },
    {
      "package": "plotrix",
      "role": "Imports"
    },
    {
      "package": "purrr",
      "role": "Imports"
    },
    {
      "package": "tibble",
      "role": "Imports"
    },
    {
      "package": "tidyr",
      "role": "Imports"
    },
    {
      "package": "units",
      "role": "Imports"
    },
    {
      "package": "magrittr",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "stplanr",
      "role": "Imports"
    },
    {
      "package": "doFuture",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "car",
      "role": "Suggests"
    },
    {
      "package": "geosphere",
      "role": "Suggests"
    },
    {
      "package": "mapview",
      "role": "Suggests"
    },
    {
      "package": "oceanmap",
      "role": "Suggests"
    },
    {
      "package": "parallel",
      "role": "Suggests"
    },
    {
      "package": "sp",
      "role": "Suggests"
    },
    {
      "package": "data.table",
      "role": "Suggests"
    }
  ],
  "_owner": "mebowers5",
  "_selfowned": false,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 7,
  "_contributors": [
    {
      "user": "mebowers5",
      "count": 96,
      "uuid": 57407056
    }
  ],
  "_userbio": {
    "uuid": 47894657,
    "type": "organization",
    "name": "Ocean Tracking Network",
    "description": "The Ocean Tracking Network (OTN) is a global aquatic research, data management and partnership platform"
  },
  "_downloads": {
    "count": 0,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/sporeg"
  },
  "_devurl": "https://github.com/mebowers5/sporeg",
  "_pkgdown": "https://mebowers5.github.io/sporeg/",
  "_searchresults": 29,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/readme.html",
    "extra/readme.md",
    "extra/sporeg.html",
    "manual.pdf"
  ],
  "_cranurl": false,
  "_exports": [
    "%>%",
    "comp_trks",
    "cts",
    "d_shore_rcvs",
    "den_rcvs",
    "depth_data",
    "dif_co",
    "gd_fts",
    "get_or",
    "gps_chr",
    "gps_fld",
    "grid_res",
    "make_line",
    "powr",
    "rcv_chr",
    "simul_trks",
    "sub_rrt",
    "zero_var"
  ],
  "_help": [
    {
      "page": "comp_trks",
      "title": "Compare grid cell counts",
      "topics": [
        "comp_trks"
      ]
    },
    {
      "page": "cts",
      "title": "Counts",
      "topics": [
        "cts"
      ]
    },
    {
      "page": "d_shore_rcvs",
      "title": "Distance to shore and density of receivers",
      "topics": [
        "d_shore_rcvs"
      ]
    },
    {
      "page": "den_rcvs",
      "title": "Summarize receiver density and counts",
      "topics": [
        "den_rcvs"
      ]
    },
    {
      "page": "depth_data",
      "title": "Calculate mean depth",
      "topics": [
        "depth_data"
      ]
    },
    {
      "page": "dif_co",
      "title": "Different cut off",
      "topics": [
        "dif_co"
      ]
    },
    {
      "page": "gd_fts",
      "title": "Good fits summary statistics",
      "topics": [
        "gd_fts"
      ]
    },
    {
      "page": "get_or",
      "title": "Get odds ratios",
      "topics": [
        "get_or"
      ]
    },
    {
      "page": "gps_chr",
      "title": "Gaps characteristics",
      "topics": [
        "gps_chr"
      ]
    },
    {
      "page": "gps_fld",
      "title": "Gaps filled",
      "topics": [
        "gps_fld"
      ]
    },
    {
      "page": "grid_res",
      "title": "Create grid",
      "topics": [
        "grid_res"
      ]
    },
    {
      "page": "make_line",
      "title": "Make a line",
      "topics": [
        "make_line"
      ]
    },
    {
      "page": "powr",
      "title": "Run a power analysis",
      "topics": [
        "powr"
      ]
    },
    {
      "page": "rcv_chr",
      "title": "Receiver characteristics",
      "topics": [
        "rcv_chr"
      ]
    },
    {
      "page": "simul_trks",
      "title": "Simulate tracks",
      "topics": [
        "simul_trks"
      ]
    },
    {
      "page": "sub_rrt",
      "title": "Re-route tracks around a barrier",
      "topics": [
        "sub_rrt"
      ]
    },
    {
      "page": "zero_var",
      "title": "Remove zero variance",
      "topics": [
        "zero_var"
      ]
    }
  ],
  "_readme": "https://github.com/mebowers5/sporeg/raw/HEAD/README.md",
  "_rundeps": [
    "askpass",
    "av",
    "BH",
    "boot",
    "Brobdingnag",
    "cellranger",
    "CircStats",
    "class",
    "classInt",
    "cli",
    "codetools",
    "cpp11",
    "crawl",
    "crayon",
    "curl",
    "data.table",
    "DBI",
    "digest",
    "doFuture",
    "doParallel",
    "doRNG",
    "dplyr",
    "e1071",
    "foreach",
    "future",
    "future.apply",
    "gdistance",
    "generics",
    "geodist",
    "geometries",
    "geosphere",
    "glatos",
    "globals",
    "glue",
    "hms",
    "httr",
    "igraph",
    "iterators",
    "jsonlite",
    "KernSmooth",
    "lattice",
    "lifecycle",
    "listenv",
    "lubridate",
    "lwgeom",
    "magrittr",
    "MASS",
    "Matrix",
    "mime",
    "momentuHMM",
    "mvtnorm",
    "nabor",
    "nanoparquet",
    "numDeriv",
    "od",
    "openssl",
    "parallelly",
    "pathroutr",
    "pbapply",
    "pillar",
    "pkgconfig",
    "plotrix",
    "prettyunits",
    "progress",
    "proxy",
    "purrr",
    "R6",
    "raster",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "readxl",
    "rematch",
    "rlang",
    "rngtools",
    "s2",
    "sf",
    "sfheaders",
    "sfnetworks",
    "sp",
    "stplanr",
    "stringi",
    "stringr",
    "sys",
    "terra",
    "tibble",
    "tidygraph",
    "tidyr",
    "tidyselect",
    "timechange",
    "units",
    "utf8",
    "vctrs",
    "withr",
    "wk",
    "zip"
  ],
  "_score": 3.0064660422492318,
  "_indexed": false,
  "_nocasepkg": "sporeg",
  "_universes": [
    "ocean-tracking-network"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-18T18:28:27.000Z",
      "distro": "noble",
      "commit": "87a62af744ae320b8e87a592fe635914e13ec363",
      "fileid": "8e1289a36118eb3e5434854ffc97854b9b962d30848dae70fbee9a79ae9e8336",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.0",
      "date": "2026-05-18T18:28:41.000Z",
      "distro": "noble",
      "commit": "87a62af744ae320b8e87a592fe635914e13ec363",
      "fileid": "8fd8e54686ac74895fd4cc4b0dc131c54675735fa4ed81261af929f48d2425bf",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-18T18:26:44.000Z",
      "commit": "87a62af744ae320b8e87a592fe635914e13ec363",
      "fileid": "3503f14b2231e3c9f63c854185523a9c6c73d80ac55cd2f6e1bab65eae86f66a",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.0",
      "date": "2026-05-18T18:26:41.000Z",
      "commit": "87a62af744ae320b8e87a592fe635914e13ec363",
      "fileid": "cff55557e273a569c6f110a076817f939acb31ce3a3d1c311e93b4bbaed667ae",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-18T18:26:37.000Z",
      "commit": "87a62af744ae320b8e87a592fe635914e13ec363",
      "fileid": "489fe4a635c817627ed47d7a2a46a1e7f475e058fe4bba3f18ed2e3d6f18b1a9",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-18T18:26:26.000Z",
      "commit": "87a62af744ae320b8e87a592fe635914e13ec363",
      "fileid": "0975d2bfb5f60aeee1540a833010800c4d627f41c6322e314038ae7791f0a429",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.0",
      "date": "2026-05-18T18:27:04.000Z",
      "commit": "87a62af744ae320b8e87a592fe635914e13ec363",
      "fileid": "a85ca251c55e0efba3d2d462c1a39b01ac492c9f78f74e0383cff2342ad43b8b",
      "status": "success",
      "check": "WARNING",
      "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.0",
      "date": "2026-06-02T15:43:44.000Z",
      "commit": "87a62af744ae320b8e87a592fe635914e13ec363",
      "fileid": "d91971af54256c5cb5937bc2433b55a4421b3e24556179ee215307e91b919e8a",
      "status": "success",
      "buildurl": "https://github.com/r-universe/ocean-tracking-network/actions/runs/26052014658"
    }
  ]
}