Package: sporeg
Title: A package to reconstruct sporadic passive tracking data and
        measure the bias and uncertainty incurred through the process
Version: 0.1.0
Authors@R: 
    person("Mary E.", "Bowers", , "mebowers5@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-5823-186X"))
Description: This package is the corresponding code for the Methods in
        Ecology and Evolution article, "A novel process to infer the
        reliability of ecological information derived from passive
        acoustic telemetry track reconstruction". The intended workflow
        is to simulate tracks inside a specified polygon, calculate
        quadrat counts inside grid cells, derive passive detection data
        from the simulated tracks using geolocations of listening
        stations, reconstruct the tracks using continuous-time
        correlated random walk models, re-route any spurious track
        intersections with a specified boundary, calculate quadrat
        counts of reconstructed tracks within grid cells, and compare
        quadrat counts between simulated and reconstructed tracks. This
        process is designed to be iterated to achieve statistical
        power. The user can then proceed with modeling the relationship
        between environmental variables and a desirable result (i.e., a
        good fit) to determine what environmental variables affect the
        odds of a good fit in grid cells.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Suggests: knitr, rmarkdown, car, geosphere, mapview, oceanmap,
        parallel, sp, data.table
VignetteBuilder: knitr
Imports: dplyr, glatos (>= 0.8.0), pathroutr (>= 0.2.1), sf (>=
        1.0-12), lubridate, momentuHMM, plotrix, purrr, tibble, tidyr,
        units, magrittr, stats, stplanr, doFuture
Remotes: jmlondon/pathroutr, ocean-tracking-network/glatos
Depends: R (>= 3.5.0)
URL: https://mebowers5.github.io/sporeg/
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libglpk-dev make libavfilter-dev libicu-dev libxml2-dev
        libssl-dev libproj-dev libsqlite3-dev libudunits2-dev
Repository: https://ocean-tracking-network.r-universe.dev
Date/Publication: 2025-03-03 19:21:03 UTC
RemoteUrl: https://github.com/mebowers5/sporeg
RemoteRef: HEAD
RemoteSha: 87a62af744ae320b8e87a592fe635914e13ec363
NeedsCompilation: no
Packaged: 2026-06-17 07:05:33 UTC; root
Author: Mary E. Bowers [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-5823-186X>)
Maintainer: Mary E. Bowers <mebowers5@gmail.com>