Package: TelemetrySpace 1.3.1

Michael OBrien

TelemetrySpace: Spatial point process and random field models for electronic tagging data

A collection of tools to fit spatial models to several types of telemetry data. Models are provided to account for the detection process when estimating individual centers of activity from acoustic telemetry data and to incorporate data from stationary test transmitters when available. Bayesian versions of models are fitted using Stan (http://mc-stan.org/). Maximum likelihood versions are fitted using Template Model Builder (https://kaskr.github.io/adcomp/index.html).

Authors:Megan Winton [aut], Michael O'Brien [cre, aut], Benjamin L. Hlina [aut]

TelemetrySpace_1.3.1.tar.gz
TelemetrySpace_1.3.1.zip(r-4.7)TelemetrySpace_1.3.1.zip(r-4.6)TelemetrySpace_1.3.1.zip(r-4.5)
TelemetrySpace_1.3.1.tgz(r-4.6-x86_64)TelemetrySpace_1.3.1.tgz(r-4.6-arm64)TelemetrySpace_1.3.1.tgz(r-4.5-x86_64)TelemetrySpace_1.3.1.tgz(r-4.5-arm64)
TelemetrySpace_1.3.1.tar.gz(r-4.7-arm64)TelemetrySpace_1.3.1.tar.gz(r-4.7-x86_64)TelemetrySpace_1.3.1.tar.gz(r-4.6-arm64)TelemetrySpace_1.3.1.tar.gz(r-4.6-x86_64)
manual.pdf |manual.html✨
card.svg |card.png
TelemetrySpace/json (API)
NEWS

# Install 'TelemetrySpace' in R:
install.packages('TelemetrySpace', repos = c('https://ocean-tracking-network.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/trackyverse/telemetryspace/issues

Pkgdown/docs site:https://telemetryspace.trackyverse.org

Uses libs:
  • c++– GNU Standard C++ Library v3
Datasets:
  • example_extent - Example array extent
  • fishdat - Black sea bass detection data
  • model_param_ex - Example model parameters
  • rlocs - Receiver locations from a black sea bass array
  • testdat - Stationary test transmitter data
  • testloc - Location of a stationary test transmitter placed in the black sea bass array
  • testY - Counts of detection per time steps for test tag
  • Y - Counts of detection per time steps

On CRAN:

Conda:

cpp

4.26 score 6 scripts 4 exports 49 dependencies

Last updated from:aaf582fdb4. Checks:12 OK, 1 FAIL. Indexed: no.

TargetResultTimeFilesSyslog
linux-devel-arm64OK736
linux-devel-x86_64OK699
source / vignettesOK735
linux-release-arm64OK700
linux-release-x86_64OK713
macos-release-arm64OK424
macos-release-x86_64OK961
macos-oldrel-arm64OK527
macos-oldrel-x86_64OK1410
windows-develOK1416
windows-releaseOK1226
windows-oldrelOK1229
wasm-releaseFAIL170

Exports:COA_StandardCOA_TagIntCOA_TimeVaryingdistf

Dependencies:abindbackportsBHcallrcheckmateclicpp11descdistributionaldplyrfarvergenericsggplot2gluegridExtragtableinlineisobandlabelinglifecycleloomagrittrmatrixStatsnumDerivpillarpkgbuildpkgconfigposteriorprocessxpsQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanrstantoolsS7scalesStanHeaderstensorAtibbletidyselectutf8vctrsviridisLitewithr

Estimate activity centers from acoustic telemetry data

Megan Winton

Rendered fromEstimate_COA_vignette.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2026-05-14
Started: 2018-06-03

Full Stan code

Rendered fromstancode.Rmdusingknitr::rmarkdownon May 22 2026.

Last update: 2026-05-21
Started: 2026-05-21