Package: wcUtils 0.1

Josh M. London

wcUtils: Utilities to Access the Wildlife Computers Data Portal API

This package provides basic access and capabilities for interacting with and downloading data from the Wildilfe Computers Data Portal API. Where appropriate functions to specify data types and tidy the data are employed.

Authors:Josh M. London [aut, cre], Alexander Zwart [ctb, cph]

wcUtils_0.1.tar.gz
wcUtils_0.1.zip(r-4.5)wcUtils_0.1.zip(r-4.4)wcUtils_0.1.zip(r-4.3)
wcUtils_0.1.tgz(r-4.4-any)wcUtils_0.1.tgz(r-4.3-any)
wcUtils_0.1.tar.gz(r-4.5-noble)wcUtils_0.1.tar.gz(r-4.4-noble)
wcUtils_0.1.tgz(r-4.4-emscripten)wcUtils_0.1.tgz(r-4.3-emscripten)
wcUtils.pdf |wcUtils.html✨
wcUtils/json (API)

# Install 'wcUtils' in R:
install.packages('wcUtils', repos = c('https://ocean-tracking-network.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/noaa-afsc/wcutils/issues

On CRAN:

animal-trackingbiologging

2.40 score 5 stars 8 scripts 24 exports 47 dependencies

Last updated 8 months agofrom:150d1047e5. Checks:OK: 1 ERROR: 6. Indexed: no.

TargetResultDate
Doc / VignettesOKNov 03 2024
R-4.5-winERRORNov 03 2024
R-4.5-linuxERRORNov 03 2024
R-4.4-winERRORNov 03 2024
R-4.4-macERRORNov 03 2024
R-4.3-winERRORNov 03 2024
R-4.3-macERRORNov 03 2024

Exports:as_ecdfcombine_ecdfdrop_ecd_duplicatesmake_namesread_allmsgread_behavread_ecdfread_fastGPSread_histosread_locssmooth_ecdftidyDiveDepthstidyDiveDurationstidyTimeAtDepthtidyTimelinesto_pdfwcGetDeployIDwcGetDownloadwcGetIDswcGetProjectIDswcGetPttIDwcGetRecentIDswcGetZipwcPOST

Dependencies:askpassbitbit64clicliprcpp11crayoncurldata.tabledigestdplyrfansifsgenericsgluehmshttrjanitorjsonlitelifecyclelubridatemagrittrmimeopensslpillarpkgconfigprettyunitsprogresspurrrR6readrrlangsnakecasestringistringrsystibbletidyrtidyselecttimechangetzdbutf8vctrsvroomwithrXMLxml2

Readme and manuals

Help Manual

Help pageTopics
Create An ECDF Listas_ecdf
Combine Two `wcECDF` Objects Into a Single ECDFcombine_ecdf
Drop duplicates within an ECDFdrop_ecd_duplicates
Tidy a comma separated value (CSV) filefixCSV
format bin labelsformat_bins
Expanded make.names function for creating consistent column namesmake_names
Parse a *-All.csv file into a proper data.frameread_allmsg
Parse a *-Behavior.csv file into a proper data.frameread_behav
Read and Tidy ECDF Data Fileread_ecdf
Parse a *-FastGPS.csv files into a proper data.frameread_fastGPS
Parse a *-Histos.csv files into a proper data.frameread_histos
Parse a *-Locations.csv files into a proper data.frameread_locs
Create smoothed ECDFsmooth_ecdf
Apply 'tidy' data principles to the dive-depth histogram data streamtidyDiveDepths
Apply 'tidy' data principles to the dive-duration histogram data streamtidyDiveDurations
Apply 'tidy' data principles to the time-at-depth histogram data streamtidyTimeAtDepth
Apply 'tidy' data principles to the timeline histogram data streamtidyTimelines
Transform a `wcECDF` Object Into a Probability Density Functionto_pdf
Return a vector of data portal unique IDs associated with a given DeployIDwcGetDeployID
Retrieve data from Wildlife Computers Data PortalwcGetDownload
Return a vector of deployment IDswcGetIDs
Return a vector of deployment IDs associated with a given ProjectwcGetProjectIDs
Return a vector of deployment ID associated with a given PTTwcGetPttID
Return a vector of deployment IDs with new data in the last 'n' dayswcGetRecentIDs
Retrieve a single zip file from Wildlife Computers Data PortalwcGetZip
Send POST to Wildlife Computers Data Portal APIwcPOST
wcUtils: A package for import/export of Wildlife Computers tag datawcUtils